ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 18098.00 66.29 78.56 93.91 SNORD105B-201 snoRNA body of pancreas (Tissue)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 762.00 31.47 3.31 51.18 SNORD121B-201 snoRNA body of pancreas (Tissue)
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 132872.00 98.11 576.77 99.14 SNORD127-201 snoRNA body of pancreas (Tissue)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 3969.00 90.16 17.23 100.0 SNORD42B-201 snoRNA body of pancreas (Tissue)
ENST00000459386.1 ENST00000459386.1_9_73_+ 9–73 97.00 57.40 0.42 100.0 SNORD121A-201 snoRNA body of pancreas (Tissue)
ENST00000459475.1 ENST00000459475.1_4_75_+ 4–75 1.00 0.13 0.00 1.33 SNORD126-201 snoRNA body of pancreas (Tissue)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 702.00 91.64 3.05 99.86 SNORD126-201 snoRNA body of pancreas (Tissue)
ENST00000459577.1 ENST00000459577.1_12_91_+ 12–91 34588.00 94.20 150.14 98.78 SNORD124-201 snoRNA body of pancreas (Tissue)
ENST00000461448.6 ENST00000461448.6_522_587_+ 522–587 4357.00 59.64 18.91 100.0 SNHG12-201 retained intron body of pancreas (Tissue)
ENST00000467105.1 ENST00000467105.1_582_665_+ 582–665 6077.00 29.57 26.38 100.0 RPL3-212 retained intron body of pancreas (Tissue)
ENST00000467105.1 ENST00000467105.1_581_668_+ 581–668 2721.00 13.24 11.81 59.57 RPL3-212 retained intron body of pancreas (Tissue)
ENST00000469129.1 ENST00000469129.1_822_842_+ 822–842 3745.00 92.81 16.26 100.0 SMC1A-204 retained intron body of pancreas (Tissue)
ENST00000471759.5 ENST00000471759.5_372_449_+ 372–449 79881.00 90.65 346.75 98.67 RABGGTB-208 protein coding CDS not defined body of pancreas (Tissue)
ENST00000481456.1 ENST00000481456.1_862_898_+ 862–898 1657.00 24.19 7.19 100.0 DDX39B-219 retained intron body of pancreas (Tissue)
ENST00000481456.1 ENST00000481456.1_825_898_+ 825–898 2050.00 29.92 8.90 100.0 DDX39B-219 retained intron body of pancreas (Tissue)
ENST00000481456.1 ENST00000481456.1_847_901_+ 847–901 842.00 12.29 3.65 100.0 DDX39B-219 retained intron body of pancreas (Tissue)
ENST00000484599.1 ENST00000484599.1_580_645_+ 580–645 2187.00 74.82 9.49 100.0 RPS8-206 protein coding CDS not defined body of pancreas (Tissue)
ENST00000484610.5 ENST00000484610.5_361_433_+ 361–433 97203.00 92.71 421.94 99.62 RPL13-207 retained intron body of pancreas (Tissue)
ENST00000484610.5 ENST00000484610.5_392_433_+ 392–433 3540.00 3.38 15.37 100.0 RPL13-207 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 978.00 0.19 4.25 100.0 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 1875.00 0.37 8.14 48.55 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 22423.00 4.41 97.33 58.47 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 371.00 0.07 1.61 24.78 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 3836.00 0.75 16.65 42.5 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 175.00 0.03 0.76 34.52 EIF4A2-219 retained intron body of pancreas (Tissue)