ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 174.00 2.52 0.76 100.0 SNORD12B-201 snoRNA body of pancreas (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 5334.00 77.23 23.15 92.91 SNORD12B-201 snoRNA body of pancreas (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 499.00 7.22 2.17 100.0 SNORD12B-201 snoRNA body of pancreas (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 3.00 0.75 0.01 100.0 Y_RNA.609-201 misc RNA body of pancreas (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 24.00 23.53 0.10 100.0 Y_RNA.612-201 misc RNA body of pancreas (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 415.00 0.10 1.80 100.0 SNORD71-201 snoRNA body of pancreas (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 395927.00 98.90 1718.64 99.94 SNORD71-201 snoRNA body of pancreas (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 434.00 0.11 1.88 100.0 SNORD71-201 snoRNA body of pancreas (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 53366.00 9.90 231.65 42.02 MIR194-2HG-201 lncRNA body of pancreas (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 483414.00 89.64 2098.41 96.53 MIR194-2HG-201 lncRNA body of pancreas (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 25.00 100.00 0.11 100.0 RPS7P15-201 processed pseudogene body of pancreas (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 8193.00 43.15 35.56 100.0 SNORD62B-201 snoRNA body of pancreas (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 985.00 5.19 4.28 100.0 SNORD62B-201 snoRNA body of pancreas (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 193.00 1.02 0.84 100.0 SNORD62B-201 snoRNA body of pancreas (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 29.00 0.15 0.13 100.0 SNORD62B-201 snoRNA body of pancreas (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 1495.00 7.87 6.49 89.31 SNORD62B-201 snoRNA body of pancreas (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 28.00 60.87 0.12 100.0 MRPL32-203 nonsense mediated decay body of pancreas (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 233.00 69.55 1.01 100.0 ENST00000436739 lncRNA body of pancreas (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1267_+ 1182–1267 10413.00 32.11 45.20 100.0 TMEM107-204 protein coding body of pancreas (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 6100.00 18.81 26.48 90.49 TMEM107-204 protein coding body of pancreas (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 36.00 0.11 0.16 100.0 TMEM107-204 protein coding body of pancreas (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 662.00 2.04 2.87 100.0 TMEM107-204 protein coding body of pancreas (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 2334.00 7.20 10.13 81.67 TMEM107-204 protein coding body of pancreas (Tissue)
ENST00000448136.6 ENST00000448136.6_1026_1098_+ 1026–1098 156.00 4.12 0.68 100.0 SNHG16-201 lncRNA body of pancreas (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 1741.00 46.00 7.56 100.0 SNHG16-201 lncRNA body of pancreas (Tissue)