ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 3720.00 11.38 16.15 83.61 SNORD90-201 snoRNA body of pancreas (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 22562.00 28.96 97.94 100.0 SNORD69-201 snoRNA body of pancreas (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 19649.00 25.22 85.29 100.0 SNORD69-201 snoRNA body of pancreas (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 3139.00 4.03 13.63 100.0 SNORD69-201 snoRNA body of pancreas (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 20642.00 26.50 89.60 100.0 SNORD69-201 snoRNA body of pancreas (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 580.00 72.23 2.52 78.8 SNORD70-201 snoRNA body of pancreas (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 149822.00 81.30 650.35 88.44 B4GALNT2-202 protein coding body of pancreas (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 294.00 0.16 1.28 100.0 B4GALNT2-202 protein coding body of pancreas (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 311.00 67.17 1.35 100.0 NDE1-202 protein coding body of pancreas (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 86.00 86.00 0.37 100.0 MIR887-201 miRNA body of pancreas (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 144.00 100.00 0.63 100.0 MIR889-201 miRNA body of pancreas (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 1308.00 49.30 5.68 100.0 SNORD111-201 snoRNA body of pancreas (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 1680.00 60.37 7.29 95.13 SNORD88A-201 snoRNA body of pancreas (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 20.00 100.00 0.09 100.0 MIR548K-201 miRNA body of pancreas (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 2583.00 74.91 11.21 100.0 MIR320B2-201 miRNA body of pancreas (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 6.00 100.00 0.03 100.0 MIR1271-201 miRNA body of pancreas (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 206.00 1.20 0.89 100.0 SNORD100-201 snoRNA body of pancreas (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1027.00 5.99 4.46 100.0 SNORD100-201 snoRNA body of pancreas (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 993.00 5.79 4.31 100.0 SNORD100-201 snoRNA body of pancreas (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 13300.00 77.61 57.73 100.0 SNORD100-201 snoRNA body of pancreas (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 9627.00 75.53 41.79 100.0 SNORD111B-201 snoRNA body of pancreas (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 367.00 0.41 1.59 100.0 RNU2-36P-201 snRNA body of pancreas (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 10404.00 11.51 45.16 100.0 RNU2-36P-201 snRNA body of pancreas (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 8302.00 1.92 36.04 100.0 SNORD19C-201 snoRNA body of pancreas (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 416172.00 96.42 1806.52 99.74 SNORD19C-201 snoRNA body of pancreas (Tissue)