ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 414.00 0.33 1.80 72.5 MT-TE-201 Mt tRNA body of pancreas (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 158.00 0.13 0.69 100.0 MT-TE-201 Mt tRNA body of pancreas (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 157.00 0.13 0.68 29.02 MT-TE-201 Mt tRNA body of pancreas (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 105623.00 84.88 458.49 91.65 MT-TE-201 Mt tRNA body of pancreas (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 337.00 0.27 1.46 100.0 MT-TE-201 Mt tRNA body of pancreas (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 684.00 0.55 2.97 88.83 MT-TE-201 Mt tRNA body of pancreas (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 3.00 0.09 0.01 100.0 MT-RNR1-201 Mt rRNA body of pancreas (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 1993.00 62.97 8.65 100.0 MT-RNR1-201 Mt rRNA body of pancreas (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 18.00 100.00 0.08 100.0 MIR454-201 miRNA body of pancreas (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 51.00 86.44 0.22 100.0 MIR501-201 miRNA body of pancreas (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 1114.00 88.34 4.84 100.0 MIR769-201 miRNA body of pancreas (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 604.00 80.86 2.62 100.0 KRTAP19-1-201 protein coding body of pancreas (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 23.00 30.67 0.10 100.0 MIR708-201 miRNA body of pancreas (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 49.00 100.00 0.21 100.0 MIR301B-201 miRNA body of pancreas (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 1291.00 28.14 5.60 70.93 RNU1-82P-201 snRNA body of pancreas (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 8051.00 17.94 34.95 66.9 SNORD66-201 snoRNA body of pancreas (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 598.00 1.33 2.60 100.0 SNORD66-201 snoRNA body of pancreas (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 6714.00 14.96 29.14 100.0 SNORD66-201 snoRNA body of pancreas (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 5513.00 12.28 23.93 100.0 SNORD66-201 snoRNA body of pancreas (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 40.00 80.00 0.17 100.0 U3.17-201 snoRNA body of pancreas (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 6116.00 86.26 26.55 100.0 SNORD17-201 snoRNA body of pancreas (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 1014.00 90.54 4.40 100.0 SNORD72-201 snoRNA body of pancreas (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 238.00 51.07 1.03 100.0 SNORD70B-201 snoRNA body of pancreas (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 7038.00 74.46 30.55 93.73 RNY4P18-201 misc RNA body of pancreas (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 3720.00 11.38 16.15 83.61 SNORD90-201 snoRNA body of pancreas (Tissue)