ENCFF225QQQ

Library Details

Organism: Homo Sapiens
Biosample: mesenchymal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR586TYR
Description: Part of ENCODE experiment ENCSR586TYR.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 27.00 1.21 0.12 69.23 ENST00000565336 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 332.00 14.93 1.50 85.57 ENST00000565336 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 6.00 0.14 0.03 100.0 RBMX-210 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 1752.00 41.48 7.91 100.0 RBMX-210 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 970.00 22.96 4.38 100.0 RBMX-210 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 444.00 10.51 2.00 99.11 RBMX-210 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 30.00 1.38 0.14 100.0 RPL4-214 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 166.00 7.63 0.75 100.0 RPL4-214 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 58.42 2.56 0.26 52.63 POLG-DT-202 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 60.64 2.66 0.27 71.34 POLG-DT-202 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 4901.00 22.09 22.12 100.0 ENST00000570843 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 134.00 68.02 0.60 100.0 MIR497HG-207 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 1792816.00 99.77 8093.40 99.9 MIR22HG-212 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 205.00 21.79 0.93 65.29 SNORD53B-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 173.00 18.38 0.78 71.19 SNORD53B-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 109.00 11.58 0.49 34.71 SNORD53B-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 1099.00 97.08 4.96 100.0 ENST00000578036 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 332.00 27.42 1.50 100.0 RPL23A-207 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 3807.00 90.99 17.19 100.0 MIR744-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 175.00 80.65 0.79 100.0 MIR378C-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 3.00 13.64 0.01 25.0 MIR142HG-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 6.00 27.27 0.03 42.86 MIR142HG-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 7394.00 72.96 33.38 85.39 RPL23A-208 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 0.75 0.01 0.00 37.46 RPL23A-208 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 3.33 0.03 0.02 83.14 RPL23A-208 retained intron mesenchymal stem cell (In vitro differentiated cells)