ENCFF225QQQ

Library Details

Organism: Homo Sapiens
Biosample: mesenchymal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR586TYR
Description: Part of ENCODE experiment ENCSR586TYR.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 1.00 0.03 0.00 100.0 WDR74-204 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 3.00 0.08 0.01 100.0 WDR74-204 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 59.00 9.52 0.27 100.0 HSPA8-211 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 191.00 7.35 0.86 100.0 SCARNA9-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 2938.00 48.67 13.26 100.0 TAF1D-215 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 1.00 0.60 0.00 100.0 HSPA8-215 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 5.00 2.99 0.02 100.0 HSPA8-215 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 6.00 0.58 0.03 100.0 RPS2-215 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 5188316.00 90.94 23421.88 91.55 ENST00000548801 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 484.00 21.01 2.18 100.0 ENST00000554988 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 86.00 3.73 0.39 100.0 ENST00000554988 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 14.00 0.61 0.06 100.0 ENST00000554988 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 40.00 1.46 0.18 100.0 SNHG14-220 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 4.00 0.15 0.02 100.0 SNHG14-220 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 587.00 21.35 2.65 100.0 SNHG14-220 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 693.00 25.21 3.13 100.0 SNHG14-220 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 348.00 99.43 1.57 100.0 TEKT4P2-201 transcribed unprocessed pseudogene mesenchymal stem cell (In vitro differentiated cells)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 762.00 11.21 3.44 100.0 RPL4-202 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 1194.00 17.56 5.39 97.07 RPL4-202 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 1308.00 19.24 5.90 100.0 RPL4-202 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 3.00 0.04 0.01 100.0 RPL4-202 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 492.00 7.24 2.22 100.0 RPL4-202 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 4208.00 9.35 19.00 100.0 ENST00000563103 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 70.00 0.94 0.32 100.0 RPL4-207 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 505.00 6.76 2.28 100.0 RPL4-207 retained intron mesenchymal stem cell (In vitro differentiated cells)