ENCFF222USQ

Library Details

Organism: Homo Sapiens
Biosample: smooth muscle cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR250STJ
Description: Part of ENCODE experiment ENCSR250STJ. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a smooth muscle pathway. They are stranded SE101 length Hi-Seq reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 599.00 59.78 0.45 100.0 MIR107-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 146.00 92.99 0.11 96.05 MIR381-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 7842.00 90.22 5.85 97.71 MIR103A2-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362155.4 ENST00000362155.4_9_29_+ 9–29 14.00 93.33 0.01 100.0 MIR369-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362155.4 ENST00000362155.4_44_64_+ 44–64 1.00 6.67 0.00 100.0 MIR369-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 640.00 45.52 0.48 100.0 MIR425-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362162.1 ENST00000362162.1_14_38_+ 14–38 269.00 19.13 0.20 100.0 MIR425-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 1074.00 48.38 0.80 100.0 MIR210-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 6310.00 95.42 4.70 96.73 MIR378A-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 1185.00 74.62 0.88 100.0 MIR361-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362195.3 ENST00000362195.3_48_66_+ 48–66 61.00 6.87 0.05 34.46 MIR101-2-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 681.00 76.69 0.51 85.45 MIR101-2-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362199.3 ENST00000362199.3_51_71_+ 51–71 23.00 60.53 0.02 100.0 MIR323A-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 142129.00 97.57 105.94 98.52 MIR26A1-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362207.3 ENST00000362207.3_15_35_+ 15–35 13.00 59.09 0.01 100.0 MIR129-2-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 1461.00 80.01 1.09 100.0 MIR342-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 1004.00 0.41 0.75 100.0 MIR148A-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 231995.00 93.65 172.92 94.5 MIR148A-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362222.4 ENST00000362222.4_50_70_+ 50–70 856.00 97.49 0.64 100.0 MIR410-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362237.3 ENST00000362237.3_15_37_+ 15–37 35.00 4.92 0.03 100.0 MIR409-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362237.3 ENST00000362237.3_47_68_+ 47–68 599.00 84.25 0.45 100.0 MIR409-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362239.4 ENST00000362239.4_16_36_+ 16–36 822.00 97.62 0.61 100.0 MIR411-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 6999.00 94.63 5.22 96.64 MIR26B-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 2066.00 78.26 1.54 86.44 MIR148B-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 232.00 84.67 0.17 98.72 MIRLET7G-201 miRNA smooth muscle cell (In vitro differentiated cells)