ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 366.00 0.25 1.79 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 106.00 0.07 0.52 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 219.00 0.15 1.07 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 60.00 0.07 0.29 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 78918.00 75.22 385.39 95.3 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 12.00 0.01 0.06 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 2495.00 10.03 12.18 47.66 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 1003.00 4.03 4.90 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 643.00 2.58 3.14 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 73.00 0.29 0.36 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 226.00 0.00 1.10 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 6306.00 54.79 30.80 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 23.00 3.44 0.11 92.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 2.00 0.30 0.01 8.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 284.00 3.62 1.39 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 9.00 0.11 0.04 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 21658.00 92.19 105.77 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 7360.00 87.48 35.94 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 4250.00 75.00 20.75 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 3183.00 14.05 15.54 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 104.00 0.46 0.51 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 28.00 0.12 0.14 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 230.00 1.02 1.12 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 41.00 0.18 0.20 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 54.00 0.24 0.26 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA transverse colon (Tissue)