ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 3369.00 28.89 16.45 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 3147.00 26.99 15.37 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 1588.00 12.92 7.75 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 14.00 0.02 0.07 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 24.00 0.00 0.12 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 502.00 0.01 2.45 13.85 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 21916.00 35.00 107.03 45.47 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 26281.00 41.97 128.34 67.38 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 18.00 0.32 0.09 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 2270894.00 76.19 11089.88 94.35 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 3862.00 0.13 18.86 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 8379.00 45.16 40.92 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 25.00 0.69 0.12 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 35.00 0.15 0.17 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 114.00 0.10 0.56 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 245.00 0.22 1.20 46.49 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 743.00 0.67 3.63 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 939.00 0.85 4.59 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 1095.00 0.99 5.35 98.03 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 6116.00 5.52 29.87 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 195.00 0.23 0.95 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 29988.00 34.82 146.45 42.54 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 98.00 0.11 0.48 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 544.00 0.37 2.66 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 125737.00 84.97 614.03 92.03 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA transverse colon (Tissue)