ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 213.00 19.83 1.04 100.0 Y_RNA.14-201 misc RNA transverse colon (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 37.00 1.50 0.18 31.9 RNA5SP370-201 rRNA pseudogene transverse colon (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 3904.00 66.35 19.07 100.0 SNORA31-201 snoRNA transverse colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 120.00 4.88 0.59 100.0 RNA5SP389-201 rRNA pseudogene transverse colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 1.00 0.04 0.00 100.0 RNA5SP389-201 rRNA pseudogene transverse colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 38.00 1.55 0.19 36.54 RNA5SP389-201 rRNA pseudogene transverse colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 67.00 2.73 0.33 69.79 RNA5SP389-201 rRNA pseudogene transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 440.00 6.49 2.15 79.85 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 728.00 10.74 3.56 72.87 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 58.04 0.86 0.28 24.39 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 646.00 9.53 3.15 83.68 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 202.00 2.98 0.99 58.21 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 460.00 6.79 2.25 100.0 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 763.00 11.26 3.73 83.12 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 259.00 3.82 1.26 50.49 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 110.77 1.63 0.54 62.23 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 243.00 3.59 1.19 64.46 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 364.12 5.37 1.78 86.49 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 48.00 0.71 0.23 100.0 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 97.40 1.44 0.48 41.8 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 259.00 3.82 1.26 29.17 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 124.00 86.11 0.61 100.0 SNORD114-14-201 snoRNA transverse colon (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 477.00 8.70 2.33 100.0 SNORD104-201 snoRNA transverse colon (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 10.00 0.18 0.05 100.0 SNORD104-201 snoRNA transverse colon (Tissue)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 66.00 67.35 0.32 94.29 SNORD115-9-201 snoRNA transverse colon (Tissue)