ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 8946.00 66.70 43.69 93.52 MIR30D-201 miRNA transverse colon (Tissue)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 3423.00 25.52 16.72 84.66 MIR30D-201 miRNA transverse colon (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 4138.00 51.84 20.21 100.0 MIR126-201 miRNA transverse colon (Tissue)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 3686.00 46.17 18.00 98.45 MIR126-201 miRNA transverse colon (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 5.00 12.20 0.02 100.0 MIR374A-201 miRNA transverse colon (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 7.00 77.78 0.03 100.0 MIR31-201 miRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 77.00 0.06 0.38 53.85 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 28.00 0.02 0.14 100.0 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 177.00 0.13 0.86 39.95 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 31.00 0.02 0.15 100.0 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 250.86 0.19 1.23 47.33 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 79.00 0.06 0.39 68.1 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 365.00 0.28 1.78 47.53 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 45.00 0.03 0.22 69.23 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 136.51 0.10 0.67 52.51 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 347.90 0.26 1.70 51.69 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 230.00 0.17 1.12 49.25 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 248.00 0.19 1.21 58.77 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 251.60 0.19 1.23 58.79 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 407.00 0.31 1.99 59.77 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 13.00 0.01 0.06 100.0 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 976.00 0.74 4.77 84.28 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 3065.00 2.31 14.97 86.85 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 1491.00 1.13 7.28 86.28 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 73276.00 55.31 357.84 99.37 RNA5S12-201 rRNA transverse colon (Tissue)