ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 239.00 6.66 1.17 100.0 ENST00000837997 lncRNA transverse colon (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 2491.00 74.18 12.16 81.57 ENST00000839036 lncRNA transverse colon (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 39.00 13.27 0.19 100.0 ENST00000849527 lncRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 242185.00 88.42 1182.71 96.55 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 5.00 0.00 0.02 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 16.00 0.00 0.08 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 1100.00 30.15 5.37 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 1518.00 41.60 7.41 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 18.00 0.85 0.09 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 35.00 0.83 0.17 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 7597.00 60.76 37.10 82.17 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 198.00 0.02 0.97 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 7.00 11.67 0.03 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 18416.00 27.31 89.93 86.73 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 4012.00 5.95 19.59 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 1489.00 18.67 7.27 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 755.00 0.03 3.69 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 610.00 0.02 2.98 87.39 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 144.00 0.00 0.70 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 238.00 0.01 1.16 89.14 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 372788.00 12.49 1820.51 39.86 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 367.00 0.01 1.79 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 18.00 0.00 0.09 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 5083.00 82.97 24.82 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 25.00 0.00 0.12 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA transverse colon (Tissue)