ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 238.00 0.84 1.16 100.0 MEG8-244 lncRNA transverse colon (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 27521.00 97.53 134.40 99.37 MEG8-244 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 261.00 0.20 1.27 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 1368.00 1.04 6.68 98.13 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 309.34 0.24 1.51 58.04 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 109.00 0.08 0.53 74.66 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 24595.00 18.71 120.11 99.46 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 90.00 0.07 0.44 76.27 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 11700.00 8.90 57.14 99.44 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 1873.00 1.42 9.15 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 14524.00 11.05 70.93 99.79 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 188.00 0.14 0.92 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 64.00 0.05 0.31 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 351.00 0.27 1.71 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 14.00 0.01 0.07 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 248.00 0.19 1.21 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 231.00 0.18 1.13 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 6259.00 4.76 30.57 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 71.00 0.05 0.35 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 193.00 0.15 0.94 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 21020.00 15.99 102.65 88.92 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 31032.00 23.60 151.54 98.49 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 15.00 0.01 0.07 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 3.00 0.00 0.01 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 1937.00 1.47 9.46 100.0 SNHG1-248 lncRNA transverse colon (Tissue)