ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 1997.00 12.27 9.75 97.04 LIMD1-AS1-204 lncRNA transverse colon (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 3189.00 67.04 15.57 81.87 MIR99AHG-262 lncRNA transverse colon (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 360.00 7.57 1.76 100.0 MIR99AHG-262 lncRNA transverse colon (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 6.00 46.15 0.03 100.0 SNHG14-270 lncRNA transverse colon (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 16.00 1.59 0.08 100.0 SNHG14-275 lncRNA transverse colon (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 69.00 81.18 0.34 98.57 MIR9-2HG-225 lncRNA transverse colon (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 131.00 40.94 0.64 100.0 MEG8-233 lncRNA transverse colon (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 46.00 14.38 0.22 100.0 MEG8-233 lncRNA transverse colon (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 56.00 3.74 0.27 100.0 SNHG14-278 lncRNA transverse colon (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 1112.00 74.33 5.43 93.6 SNHG14-278 lncRNA transverse colon (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 132.00 24.67 0.64 100.0 MEG8-234 lncRNA transverse colon (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 118.00 22.06 0.58 100.0 MEG8-234 lncRNA transverse colon (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 800.00 69.44 3.91 100.0 SNHG17-252 lncRNA transverse colon (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 143.00 13.65 0.70 65.9 SNHG14-288 lncRNA transverse colon (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 807.00 77.00 3.94 97.82 SNHG14-288 lncRNA transverse colon (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 1.00 2.22 0.00 100.0 SNHG14-295 lncRNA transverse colon (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 64.00 51.61 0.31 100.0 MEG8-240 lncRNA transverse colon (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 109.00 28.02 0.53 100.0 SNHG14-303 lncRNA transverse colon (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 3.00 4.17 0.01 100.0 SNHG14-306 lncRNA transverse colon (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 29.00 40.28 0.14 100.0 SNHG14-306 lncRNA transverse colon (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 2.00 0.17 0.01 100.0 ENST00000666735 lncRNA transverse colon (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 113.00 52.07 0.55 100.0 MEG8-242 lncRNA transverse colon (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 51.62 24.23 0.25 42.66 SNHG14-312 lncRNA transverse colon (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 59.46 27.92 0.29 49.14 SNHG14-312 lncRNA transverse colon (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 23.00 0.08 0.11 100.0 MEG8-244 lncRNA transverse colon (Tissue)