ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 2860.00 30.36 13.97 58.81 NOP56-219 retained intron transverse colon (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 65.00 0.69 0.32 100.0 NOP56-219 retained intron transverse colon (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 670.00 7.11 3.27 100.0 NOP56-219 retained intron transverse colon (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 1370.00 14.54 6.69 87.71 NOP56-219 retained intron transverse colon (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 123.00 1.99 0.60 44.24 RNA5-8SN2-201 rRNA transverse colon (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 1137.72 18.38 5.56 33.33 RNA5-8SN2-201 rRNA transverse colon (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 27.00 0.44 0.13 100.0 RNA5-8SN2-201 rRNA transverse colon (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 258.00 4.17 1.26 100.0 RNA5-8SN2-201 rRNA transverse colon (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 10.00 0.16 0.05 100.0 RNA5-8SN2-201 rRNA transverse colon (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 250.00 4.04 1.22 67.02 RNA5-8SN2-201 rRNA transverse colon (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 2087.17 33.72 10.19 61.14 RNA5-8SN2-201 rRNA transverse colon (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 15.00 83.33 0.07 100.0 MIR7974-201 miRNA transverse colon (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 2.00 100.00 0.01 100.0 MIR376A1-201 miRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 468.00 1.01 2.29 100.0 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 71.12 0.15 0.35 23.55 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 7.00 0.02 0.03 100.0 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 31.00 0.07 0.15 79.49 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 5.00 0.01 0.02 100.0 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 210.67 0.45 1.03 69.76 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 34838.00 75.13 170.13 100.0 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 900.00 1.94 4.40 100.0 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 88.00 0.19 0.43 100.0 U2.3-201 snRNA transverse colon (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 430.00 4.46 2.10 100.0 U2.6-201 snRNA transverse colon (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 52.00 0.46 0.25 22.51 ENST00000619323 lncRNA transverse colon (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 10506.00 93.01 51.31 97.46 ENST00000619323 lncRNA transverse colon (Tissue)