ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 1785.00 19.62 8.72 75.28 MT-TF-201 Mt tRNA transverse colon (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 187.00 2.05 0.91 32.41 MT-TF-201 Mt tRNA transverse colon (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 3653.00 40.14 17.84 100.0 MT-TF-201 Mt tRNA transverse colon (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 609.00 27.15 2.97 100.0 MT-TV-201 Mt tRNA transverse colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 11.00 0.10 0.05 100.0 MT-RNR2-201 Mt rRNA transverse colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 1055.00 9.71 5.15 91.58 MT-RNR2-201 Mt rRNA transverse colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 284.00 2.61 1.39 100.0 MT-RNR2-201 Mt rRNA transverse colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 34.00 0.31 0.17 100.0 MT-RNR2-201 Mt rRNA transverse colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 1088.00 10.01 5.31 89.4 MT-RNR2-201 Mt rRNA transverse colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 107.00 0.98 0.52 100.0 MT-RNR2-201 Mt rRNA transverse colon (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 115.00 8.24 0.56 100.0 MT-TI-201 Mt tRNA transverse colon (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 632.00 45.30 3.09 96.19 MT-TI-201 Mt tRNA transverse colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 1951.27 18.97 9.53 62.72 MT-TQ-201 Mt tRNA transverse colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 3290.75 31.99 16.07 59.96 MT-TQ-201 Mt tRNA transverse colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 5.00 0.05 0.02 100.0 MT-TQ-201 Mt tRNA transverse colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 3006.00 29.22 14.68 88.52 MT-TQ-201 Mt tRNA transverse colon (Tissue)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 3300.00 25.79 16.12 100.0 MT-TM-201 Mt tRNA transverse colon (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 7974.00 62.31 38.94 96.33 MT-TM-201 Mt tRNA transverse colon (Tissue)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 335.00 6.91 1.64 100.0 MT-TC-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_28_+ 1–28 1933.00 5.19 9.44 100.0 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 12324.00 33.06 60.18 69.31 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 260.00 0.70 1.27 100.0 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 4393.00 11.79 21.45 88.64 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 2017.00 5.41 9.85 100.0 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 7814.00 20.96 38.16 100.0 MT-TY-201 Mt tRNA transverse colon (Tissue)