ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 6024.00 96.18 29.42 97.79 MIR186-201 miRNA transverse colon (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 4454.00 90.11 21.75 100.0 MIR200B-201 miRNA transverse colon (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 50.00 52.08 0.24 100.0 MIR218-1-201 miRNA transverse colon (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 3837.00 92.08 18.74 96.21 MIR181B2-201 miRNA transverse colon (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 1408786.00 91.02 6879.79 91.46 MIR10B-201 miRNA transverse colon (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 85.49 39.21 0.42 54.8 MIR130B-201 miRNA transverse colon (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 105.04 48.18 0.51 54.71 MIR130B-201 miRNA transverse colon (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 15.00 6.88 0.07 100.0 MIR130B-201 miRNA transverse colon (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 5486.00 48.71 26.79 100.0 MIR199A1-201 miRNA transverse colon (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 12.00 80.00 0.06 100.0 MIR487B-201 miRNA transverse colon (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 194.53 25.77 0.95 34.8 MIR93-201 miRNA transverse colon (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 506.83 67.13 2.48 70.89 MIR93-201 miRNA transverse colon (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 326.00 83.80 1.59 93.14 MIR532-201 miRNA transverse colon (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 57.00 87.69 0.28 100.0 MIR15B-201 miRNA transverse colon (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 191.00 68.21 0.93 100.0 MIR150-201 miRNA transverse colon (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 13.00 52.00 0.06 100.0 MIR542-201 miRNA transverse colon (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 15.00 3.38 0.07 100.0 MIR500A-201 miRNA transverse colon (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 351.00 79.05 1.71 100.0 MIR500A-201 miRNA transverse colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 9785.00 58.58 47.78 95.82 MIR30A-201 miRNA transverse colon (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 520.00 3.11 2.54 100.0 MIR30A-201 miRNA transverse colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 84.00 0.50 0.41 100.0 MIR30A-201 miRNA transverse colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 5745.00 34.39 28.06 93.08 MIR30A-201 miRNA transverse colon (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 50321.00 93.45 245.74 95.42 MIR27B-201 miRNA transverse colon (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 296.00 0.55 1.45 100.0 MIR27B-201 miRNA transverse colon (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 666.00 88.80 3.25 100.0 MIR196A2-201 miRNA transverse colon (Tissue)