ENCFF195CBI

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR626GVP
Description: Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 13.00 1.15 0.06 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 350.00 30.97 1.74 91.62 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 145.00 0.03 0.72 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 1149.00 58.15 5.72 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 8.00 4.44 0.04 88.89 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 1.00 0.56 0.00 11.11 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 135.00 5.12 0.67 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 5778.00 96.04 28.78 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 28.00 40.58 0.14 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 187.00 65.16 0.93 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 9.00 0.08 0.04 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 871.00 7.47 4.34 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 15.00 0.13 0.07 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 466.00 4.00 2.32 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 190.00 1.63 0.95 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 1.00 0.01 0.00 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 387.00 0.08 1.93 73.02 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 445.00 0.09 2.22 57.27 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 783.00 0.16 3.90 89.08 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 1410.00 26.34 7.02 56.29 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 4486.00 96.91 22.34 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 144.00 20.43 0.72 91.72 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 1147.00 98.96 5.71 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 89.00 0.20 0.44 100.0 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 28938.00 65.56 144.14 74.29 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA testis (Tissue)