ENCFF195CBI

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR626GVP
Description: Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 1690.00 31.73 8.42 59.61 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 2.00 0.07 0.01 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 353.00 0.08 1.76 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 311328.00 66.33 1550.70 97.53 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 420.00 34.51 2.09 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 2.00 0.14 0.01 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 24.00 0.21 0.12 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 42.00 0.41 0.21 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 162.00 1.60 0.81 42.52 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 64.00 0.63 0.32 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 10.00 0.10 0.05 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 714.00 7.04 3.56 99.58 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 48.00 0.47 0.24 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 2005.00 34.69 9.99 51.29 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 13.00 0.22 0.06 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 4.00 0.07 0.02 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 14005.00 81.08 69.76 96.5 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 100.00 0.58 0.50 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 36.00 0.21 0.18 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 342.00 1.98 1.70 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 169.00 0.98 0.84 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 2.00 0.04 0.01 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 5707.00 64.42 28.43 96.5 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 26.00 2.30 0.13 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 279.00 24.69 1.39 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA testis (Tissue)