ENCFF195CBI

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR626GVP
Description: Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 147764.00 93.64 736.00 100.0 SNHG32-223 lncRNA testis (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 15128.00 94.33 75.35 99.45 SNHG32-227 lncRNA testis (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 257.00 1.60 1.28 100.0 SNHG32-227 lncRNA testis (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 31.00 0.19 0.15 100.0 SNHG32-227 lncRNA testis (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 9.00 0.06 0.04 100.0 SNHG32-227 lncRNA testis (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 146.00 71.57 0.73 100.0 B4GALT1-203 nonsense mediated decay testis (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 965.00 15.53 4.81 100.0 ENST00000722183 lncRNA testis (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 338.00 5.44 1.68 81.84 ENST00000722183 lncRNA testis (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 106.00 1.71 0.53 100.0 ENST00000722183 lncRNA testis (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 84.00 14.00 0.42 100.0 MIR34BHG-202 lncRNA testis (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 3876.00 78.10 19.31 83.02 THBS3-AS1-228 lncRNA testis (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 9.00 28.12 0.04 100.0 MIR200CHG-202 lncRNA testis (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 5.00 15.62 0.02 100.0 MIR200CHG-202 lncRNA testis (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 471.00 17.84 2.35 100.0 SNHG16-266 lncRNA testis (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 168.00 6.36 0.84 100.0 SNHG16-266 lncRNA testis (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 332.00 12.58 1.65 100.0 SNHG16-266 lncRNA testis (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 6.00 8.96 0.03 100.0 MEG8-261 lncRNA testis (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 21.00 30.88 0.10 100.0 NR2F2-AS1-327 lncRNA testis (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 85.00 2.31 0.42 43.81 ENST00000747675 lncRNA testis (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 1194.00 32.42 5.95 100.0 ENST00000747675 lncRNA testis (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 69.00 1.87 0.34 44.81 ENST00000747675 lncRNA testis (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 40.00 1.09 0.20 32.0 ENST00000747675 lncRNA testis (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 781.00 21.21 3.89 100.0 ENST00000747675 lncRNA testis (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 9278.00 46.38 46.21 90.42 SNHG26-250 lncRNA testis (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 7969.00 39.83 39.69 100.0 SNHG26-250 lncRNA testis (Tissue)