ENCFF195CBI

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR626GVP
Description: Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 1.00 33.33 0.00 100.0 MIR376A1-201 miRNA testis (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 185.00 0.83 0.92 100.0 U2.3-201 snRNA testis (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 57.00 0.25 0.28 26.39 U2.3-201 snRNA testis (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 72.00 0.32 0.36 100.0 U2.3-201 snRNA testis (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 792.00 3.54 3.94 100.0 U2.3-201 snRNA testis (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 1272.00 5.68 6.34 100.0 U2.3-201 snRNA testis (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 297.00 1.40 1.48 100.0 U2.6-201 snRNA testis (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 12.00 0.09 0.06 9.68 ENST00000619323 lncRNA testis (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 12398.00 96.23 61.75 97.19 ENST00000619323 lncRNA testis (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 312.00 19.95 1.55 100.0 SCARNA4-202 scaRNA testis (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 825.00 85.49 4.11 100.0 ENST00000625572 miRNA testis (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 2668.00 93.61 13.29 100.0 ENST00000630615 snoRNA testis (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 41.00 48.24 0.20 100.0 DMRT2-209 protein coding testis (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 2.00 2.35 0.01 100.0 DMRT2-209 protein coding testis (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 463.00 46.96 2.31 100.0 SNORD98-201 snoRNA testis (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 264.00 26.77 1.31 100.0 SNORD98-201 snoRNA testis (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 45804.85 73.78 228.15 75.82 MIR106AHG-201 lncRNA testis (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 1.00 0.00 0.00 100.0 MIR106AHG-201 lncRNA testis (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 6.82 0.01 0.03 85.2 MIR106AHG-201 lncRNA testis (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 538.00 33.92 2.68 100.0 MEG8-222 lncRNA testis (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 443.00 27.93 2.21 100.0 MEG8-222 lncRNA testis (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 153.00 0.95 0.76 100.0 SNHG14-224 lncRNA testis (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 9652.00 59.73 48.08 91.19 SNHG14-224 lncRNA testis (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 1804.00 11.16 8.99 50.57 SNHG14-224 lncRNA testis (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 823.63 8.00 4.10 54.22 5S_rRNA.20-201 rRNA pseudogene testis (Tissue)