ENCFF193XIP

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 1853.31 7.06 1.53 31.99 RNY1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 298.00 1.14 0.25 100.0 RNY1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 1233.00 4.70 1.02 100.0 RNY1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 1962.00 7.48 1.62 100.0 RNY1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 77.00 54.23 0.06 100.0 SNORD115-42-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 143.00 0.50 0.12 100.0 RNA5SP202-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 192.00 0.67 0.16 100.0 RNA5SP202-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 228.00 0.80 0.19 100.0 RNA5SP202-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 1741.00 6.12 1.44 100.0 RNA5SP202-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 276.00 0.97 0.23 100.0 RNA5SP202-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 25.00 0.09 0.02 100.0 RNA5SP202-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 292.72 1.03 0.24 58.31 RNA5SP202-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 1549.44 5.44 1.28 27.35 RNA5SP202-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 343.72 1.21 0.28 63.53 RNA5SP202-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 186.00 20.04 0.15 100.0 SNORD114-9-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 139.00 14.98 0.11 100.0 SNORD114-9-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 1765.00 40.00 1.46 100.0 Y_RNA.234-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 11.00 0.05 0.01 100.0 RNA5S9-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 173.00 90.10 0.14 100.0 SNORD115-23-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 13.00 0.43 0.01 100.0 RNA5SP141-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 21.00 13.29 0.02 100.0 SNORD114-15-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 1237.00 77.12 1.02 100.0 ENST00000364722 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 122.00 57.01 0.10 100.0 SNORD115-15-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 14493.00 94.47 11.95 100.0 SNORD52-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 5480.00 33.56 4.52 41.27 SNORD117-201 snoRNA neural progenitor cell (In vitro differentiated cells)