ENCFF193XIP

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 975.00 7.29 0.80 52.14 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 1804.00 15.34 1.49 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 322.00 4.72 0.27 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 2156.00 31.59 1.78 88.29 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 960.00 14.07 0.79 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 60.00 0.88 0.05 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 14.00 0.21 0.01 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 1688.00 17.25 1.39 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 283.00 7.05 0.23 65.06 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 390.00 7.63 0.32 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 11322.00 62.91 9.34 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 31.00 0.17 0.03 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 2.00 0.01 0.00 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 37.00 0.21 0.03 67.27 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 461.00 0.16 0.38 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 5.00 1.67 0.00 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 14.00 0.90 0.01 60.87 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 112.00 7.21 0.09 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 9.00 0.58 0.01 39.13 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 13.00 0.07 0.01 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 6332.00 31.97 5.22 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 1.00 0.18 0.00 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 138.00 30.94 0.11 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 519.00 0.17 0.43 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 37.00 0.01 0.03 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA neural progenitor cell (In vitro differentiated cells)