ENCFF193XIP

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 2610.00 3.82 2.15 44.69 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 4940.00 7.23 4.07 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 45.00 0.07 0.04 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 379286.00 92.61 312.82 99.71 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 29.00 8.24 0.02 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 6.00 1.70 0.00 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 69.00 9.39 0.06 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 69.00 0.71 0.06 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 6.00 0.00 0.00 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 1806.00 0.44 1.49 80.77 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 317.00 14.64 0.26 93.24 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 34.00 1.57 0.03 9.69 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 423.00 13.67 0.35 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 2931.00 4.71 2.42 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 21109.00 33.91 17.41 92.32 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 144.00 12.03 0.12 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 11.00 1.28 0.01 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 240.00 0.08 0.20 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 1992.00 20.56 1.64 48.17 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 3722.00 38.41 3.07 86.6 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 175.00 1.81 0.14 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 72.00 0.74 0.06 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 112.00 1.16 0.09 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 33.00 0.34 0.03 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 2796.00 20.90 2.31 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA neural progenitor cell (In vitro differentiated cells)