ENCFF193XIP

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 2077.00 7.25 1.71 100.0 ENST00000756336 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 509.00 1.78 0.42 100.0 ENST00000756336 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 349.00 1.22 0.29 100.0 ENST00000756336 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 85.72 0.30 0.07 1.64 ENST00000756336 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 5752.67 20.07 4.74 94.46 ENST00000756336 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 178.09 0.62 0.15 26.54 ENST00000756336 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 238.65 0.83 0.20 41.29 ENST00000756336 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 11038.00 38.50 9.10 100.0 ENST00000756336 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 961.76 3.35 0.79 88.81 ENST00000756336 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 2.00 2.06 0.00 100.0 ENST00000756452 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 89.00 10.11 0.07 100.0 ENST00000760093 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 2.00 0.23 0.00 100.0 ENST00000760093 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 800479.00 95.92 660.21 97.54 SNHG14-356 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 9836.00 30.21 8.11 96.0 LINC02806-241 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 3860.00 11.86 3.18 100.0 LINC02806-241 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 101.00 0.31 0.08 100.0 LINC02806-241 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 2420.00 7.43 2.00 56.59 LINC02806-241 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 1126.00 94.46 0.93 100.0 EHBP1-AS1-210 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 164.00 18.53 0.14 100.0 ENST00000770398 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 263.00 29.72 0.22 100.0 ENST00000770398 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 2.00 0.23 0.00 100.0 ENST00000770398 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 229.00 6.67 0.19 100.0 ENST00000771298 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 5.00 0.15 0.00 100.0 ENST00000771298 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 925.00 26.95 0.76 77.15 ENST00000771298 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 86.00 2.51 0.07 100.0 ENST00000771298 lncRNA neural progenitor cell (In vitro differentiated cells)