ENCFF193XIP

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 21.00 18.42 0.02 95.45 MIR126-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 6.00 27.27 0.00 100.0 MIR374A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 134.00 77.01 0.11 100.0 MIR31-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 208.00 0.37 0.17 82.87 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 345.00 0.61 0.28 93.5 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 69.00 0.12 0.06 85.19 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 92.00 0.16 0.08 91.09 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 24.00 0.04 0.02 100.0 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 150.00 0.27 0.12 71.09 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 981.00 1.74 0.81 100.0 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 65.41 0.12 0.05 35.17 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 6.00 0.01 0.00 100.0 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 86.19 0.15 0.07 48.42 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 147.00 0.26 0.12 69.67 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 22801.00 40.54 18.81 99.89 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 138.00 0.25 0.11 56.79 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 46.00 0.08 0.04 82.14 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 97.28 0.17 0.08 65.73 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 156.73 0.28 0.13 69.04 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 302.00 0.54 0.25 44.81 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 66.00 0.12 0.05 61.68 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 1906.00 3.39 1.57 83.67 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 328.00 10.02 0.27 100.0 Y_RNA.14-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 50.00 60.98 0.04 100.0 SNORD115-34-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 212.00 7.80 0.17 100.0 RNU5E-1-201 snRNA neural progenitor cell (In vitro differentiated cells)