ENCFF193XIP

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362155.4 ENST00000362155.4_9_29_+ 9–29 2.00 100.00 0.00 100.0 MIR369-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362162.1 ENST00000362162.1_14_38_+ 14–38 164.00 32.48 0.14 100.0 MIR425-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 182.00 36.04 0.15 100.0 MIR425-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 195.00 61.90 0.16 100.0 MIR210-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 1922.00 96.78 1.59 97.96 MIR378A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 588.00 82.12 0.48 100.0 MIR361-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 252.00 91.30 0.21 96.55 MIR101-2-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362195.3 ENST00000362195.3_48_66_+ 48–66 1.00 0.36 0.00 10.0 MIR101-2-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362199.3 ENST00000362199.3_51_71_+ 51–71 7.00 46.67 0.01 100.0 MIR323A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 15596.00 98.29 12.86 99.06 MIR26A1-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362207.3 ENST00000362207.3_15_35_+ 15–35 6.00 50.00 0.00 100.0 MIR129-2-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 443.00 69.54 0.37 100.0 MIR342-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 49.00 0.70 0.04 100.0 MIR148A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 6212.00 88.67 5.12 89.86 MIR148A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362222.4 ENST00000362222.4_50_70_+ 50–70 107.00 100.00 0.09 100.0 MIR410-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362237.3 ENST00000362237.3_47_68_+ 47–68 216.00 85.71 0.18 100.0 MIR409-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362237.3 ENST00000362237.3_15_37_+ 15–37 3.00 1.19 0.00 100.0 MIR409-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362239.4 ENST00000362239.4_16_36_+ 16–36 92.00 90.20 0.08 100.0 MIR411-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 624.00 95.12 0.51 97.96 MIR26B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 614.00 85.63 0.51 95.05 MIR148B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 4.00 40.00 0.00 100.0 MIRLET7G-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362283.1 ENST00000362283.1_6_21_+ 6–21 175.00 4.12 0.14 100.0 MIR30D-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 3993.00 94.11 3.29 99.23 MIR30D-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 27.00 0.64 0.02 46.55 MIR30D-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 82.00 71.93 0.07 100.0 MIR126-201 miRNA neural progenitor cell (In vitro differentiated cells)