ENCFF193XIP

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 937.00 0.70 0.77 63.7 MT-TY-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387409.1 ENST00000387409.1_1_28_+ 1–28 655.00 0.49 0.54 100.0 MT-TY-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 2829.00 2.10 2.33 88.54 MT-TY-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 11.00 11.34 0.01 100.0 MT-TD-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 3.00 0.03 0.00 100.0 MT-TK-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 3095.00 34.94 2.55 100.0 MT-TK-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 2897.00 32.71 2.39 100.0 MT-TK-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 58.00 0.65 0.05 100.0 MT-TK-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 111.00 13.69 0.09 76.55 MT-TS2-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 25.00 3.08 0.02 100.0 MT-TS2-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 182.00 22.44 0.15 100.0 MT-TS2-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 272.00 13.31 0.22 100.0 MT-TL2-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 485.00 0.62 0.40 78.73 MT-TE-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 131.00 0.17 0.11 37.43 MT-TE-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 12.00 0.02 0.01 100.0 MT-TE-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 51143.00 65.24 42.18 83.91 MT-TE-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 480.00 0.61 0.40 100.0 MT-TE-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 1056.00 1.35 0.87 100.0 MT-TE-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 2486.00 3.17 2.05 80.95 MT-TE-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 1494.00 14.30 1.23 100.0 MT-RNR1-201 Mt rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 1763.00 16.88 1.45 100.0 MT-RNR1-201 Mt rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 267.00 65.93 0.22 100.0 MIR454-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 157.00 42.09 0.13 100.0 MIR501-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 1219.00 93.20 1.01 100.0 MIR769-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 367.00 83.60 0.30 100.0 KRTAP19-1-201 protein coding neural progenitor cell (In vitro differentiated cells)