ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 2.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 1330.00 0.96 8.02 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 3224.00 36.03 19.44 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 183.00 0.01 1.10 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 135.00 0.01 0.81 72.19 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 374.00 0.02 2.26 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 85.00 0.01 0.51 77.98 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 258461.00 16.42 1558.56 45.22 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 75.00 0.00 0.45 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 34.00 0.00 0.21 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 1975.00 71.40 11.91 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 29.00 0.00 0.17 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 999.00 10.64 6.02 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 2580.00 27.48 15.56 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 711.00 6.33 4.29 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 13.00 0.02 0.08 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 707.00 0.02 4.26 23.13 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 27.00 0.00 0.16 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 13981.00 19.21 84.31 60.48 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 13914.00 19.12 83.90 49.88 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 1186540.00 75.69 7155.03 95.09 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 3299.00 0.21 19.89 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 10845.00 34.30 65.40 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 15.00 0.22 0.09 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 102.00 0.11 0.62 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA upper lobe of left lung (Tissue)