ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 2098.00 5.28 12.65 100.0 GAS5-377 lncRNA upper lobe of left lung (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 523.00 1.32 3.15 100.0 GAS5-377 lncRNA upper lobe of left lung (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 26.00 0.07 0.16 100.0 GAS5-377 lncRNA upper lobe of left lung (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 35924.00 90.43 216.63 100.0 GAS5-377 lncRNA upper lobe of left lung (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 34.00 66.67 0.21 100.0 MIR205HG-245 lncRNA upper lobe of left lung (Tissue)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 30.00 5.58 0.18 100.0 TAF12-DT-204 lncRNA upper lobe of left lung (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 6.00 0.22 0.04 100.0 ZFAS1-238 lncRNA upper lobe of left lung (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 35.00 1.26 0.21 100.0 ZFAS1-238 lncRNA upper lobe of left lung (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 11.00 0.40 0.07 100.0 ZFAS1-238 lncRNA upper lobe of left lung (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1484.00 53.34 8.95 100.0 ZFAS1-238 lncRNA upper lobe of left lung (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 2210.00 89.04 13.33 100.0 ZFAS1-242 lncRNA upper lobe of left lung (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 26029.00 69.00 156.96 100.0 ENST00000837997 lncRNA upper lobe of left lung (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 1130.00 3.00 6.81 100.0 ENST00000837997 lncRNA upper lobe of left lung (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 4614.00 71.61 27.82 79.62 ENST00000839036 lncRNA upper lobe of left lung (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 60.00 9.92 0.36 100.0 ENST00000849527 lncRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 197394.00 90.48 1190.32 97.58 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 21.00 0.00 0.13 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 928.00 13.78 5.60 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 3925.00 58.29 23.67 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 16.00 1.21 0.10 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 127.00 0.55 0.77 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 7561.00 76.01 45.59 90.68 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 628.00 0.10 3.79 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 11.00 20.37 0.07 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 50597.00 36.48 305.11 85.98 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA upper lobe of left lung (Tissue)