ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 98352.00 40.21 593.08 99.24 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 12043.00 4.92 72.62 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 23999.00 9.81 144.72 99.78 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 76.00 0.03 0.46 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 80.00 0.03 0.48 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 1329.00 0.54 8.01 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 239.00 0.10 1.44 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 546.00 0.22 3.29 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 29776.00 12.17 179.55 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 76.00 0.03 0.46 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 1798.00 0.74 10.84 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 22754.00 9.30 137.21 81.12 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 386.00 0.16 2.33 85.78 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 679.00 0.28 4.09 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 741.00 0.30 4.47 91.82 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 409.09 0.17 2.47 35.06 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 1254.00 0.51 7.56 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 283.00 0.12 1.71 57.4 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1879.00 0.77 11.33 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 229.00 1.31 1.38 100.0 SNHG5-273 lncRNA upper lobe of left lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 1048.00 6.02 6.32 100.0 SNHG5-273 lncRNA upper lobe of left lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 147.71 0.85 0.89 90.62 SNHG5-273 lncRNA upper lobe of left lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 165.00 0.95 0.99 100.0 SNHG5-273 lncRNA upper lobe of left lung (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 93.00 0.53 0.56 100.0 SNHG5-273 lncRNA upper lobe of left lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 1.89 0.01 0.01 1.16 SNHG5-273 lncRNA upper lobe of left lung (Tissue)