ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 1696.00 2.31 10.23 57.05 CTC1-214 protein coding upper lobe of left lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 12016.00 16.38 72.46 56.88 CTC1-214 protein coding upper lobe of left lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 544.00 0.74 3.28 100.0 CTC1-214 protein coding upper lobe of left lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 2842.00 3.87 17.14 100.0 CTC1-214 protein coding upper lobe of left lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 237.00 0.32 1.43 100.0 CTC1-214 protein coding upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 1466.00 2.22 8.84 74.0 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 1878.00 2.84 11.32 89.3 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 92.00 0.14 0.55 100.0 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 1600.00 2.42 9.65 63.07 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 71.00 0.11 0.43 100.0 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 33.00 0.05 0.20 100.0 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 515.00 0.78 3.11 100.0 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 5175.00 7.83 31.21 23.85 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 1204.00 1.82 7.26 100.0 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 39848.00 60.29 240.29 81.74 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 9640.00 3.40 58.13 100.0 MIRLET7A1HG-203 lncRNA upper lobe of left lung (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 101.00 73.19 0.61 100.0 MEG8-225 lncRNA upper lobe of left lung (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 1646.00 53.60 9.93 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 723.00 23.54 4.36 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 21.00 0.68 0.13 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 71.00 2.61 0.43 100.0 SNHG14-234 lncRNA upper lobe of left lung (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 119.00 4.38 0.72 100.0 SNHG14-234 lncRNA upper lobe of left lung (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 354.00 1.87 2.13 100.0 ENST00000655317 lncRNA upper lobe of left lung (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 12241.00 64.62 73.82 94.31 ENST00000655317 lncRNA upper lobe of left lung (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 5136.00 1.80 30.97 88.28 LINC01962-202 lncRNA upper lobe of left lung (Tissue)