ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 1413.00 12.88 8.52 100.0 RPL4-207 retained intron upper lobe of left lung (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 1906409.00 94.23 11495.97 96.76 ENST00000565336 lncRNA upper lobe of left lung (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 12641.00 0.62 76.23 64.64 ENST00000565336 lncRNA upper lobe of left lung (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 2406.00 25.55 14.51 100.0 RBMX-210 retained intron upper lobe of left lung (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 3544.00 37.64 21.37 100.0 RBMX-210 retained intron upper lobe of left lung (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 17.00 0.18 0.10 16.83 RBMX-210 retained intron upper lobe of left lung (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 255.00 17.77 1.54 100.0 RPL4-214 retained intron upper lobe of left lung (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 17855.05 12.11 107.67 15.88 POLG-DT-202 lncRNA upper lobe of left lung (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 96265.36 65.29 580.50 83.86 POLG-DT-202 lncRNA upper lobe of left lung (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 277.00 0.19 1.67 100.0 POLG-DT-202 lncRNA upper lobe of left lung (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 2523.00 18.21 15.21 100.0 ENST00000570843 lncRNA upper lobe of left lung (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 627.00 63.08 3.78 100.0 MIR497HG-207 lncRNA upper lobe of left lung (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 60637.00 97.47 365.65 98.01 MIR22HG-212 lncRNA upper lobe of left lung (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 1220.00 53.30 7.36 67.37 SNORD53B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 591.00 25.82 3.56 32.63 SNORD53B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 111.00 28.76 0.67 100.0 ENST00000578036 lncRNA upper lobe of left lung (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 140.00 68.97 0.84 100.0 RPL23A-207 protein coding upper lobe of left lung (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 397.00 92.54 2.39 100.0 MIR744-201 miRNA upper lobe of left lung (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 301.00 74.14 1.82 100.0 MIR378C-201 miRNA upper lobe of left lung (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 2691.00 71.38 16.23 81.89 MIR142HG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 2.00 0.05 0.01 100.0 MIR142HG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 185.00 4.91 1.12 15.25 MIR142HG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 9.98 0.00 0.06 83.14 RPL23A-208 retained intron upper lobe of left lung (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 231821.00 86.39 1397.92 90.78 RPL23A-208 retained intron upper lobe of left lung (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 35176.00 13.11 212.12 89.14 RPL23A-208 retained intron upper lobe of left lung (Tissue)