ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 372.00 19.89 1.41 100.0 RNU5B-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 2485.00 84.73 9.45 96.88 SNORD115-18-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 86.00 1.68 0.33 61.87 RNY4P27-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 562.00 11.00 2.14 91.38 RNY4P27-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 573.00 10.22 2.18 100.0 Y_RNA.136-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 248.00 31.79 0.94 100.0 SNORD115-41-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363633.1 ENST00000363633.1_2_82_+ 2–82 6.00 1.04 0.02 100.0 SNORD115-5-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 42.00 19.53 0.16 100.0 SNORD115-33-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 513.00 76.23 1.95 99.81 SNORD114-25-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 483.00 79.05 1.84 100.0 SNORD113-7-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363856.1 ENST00000363856.1_2_82_+ 2–82 1.00 0.28 0.00 100.0 SNORD115-8-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 138.00 18.57 0.52 100.0 Y_RNA.181-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 40.00 7.33 0.15 100.0 SNORD115-16-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 47.00 21.76 0.18 100.0 SNORD115-32-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 65.00 19.64 0.25 100.0 SNORD115-30-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 230.00 1.06 0.87 100.0 RNY1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 20.00 0.09 0.08 100.0 RNY1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 5364.76 24.81 20.40 59.15 RNY1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 377.46 1.75 1.44 9.41 RNY1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 4888.00 22.61 18.59 100.0 RNY1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 176.00 23.72 0.67 100.0 SNORD115-42-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 7670.00 5.48 29.16 100.0 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 324.00 0.23 1.23 100.0 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 505.00 0.36 1.92 100.0 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 3701.99 2.64 14.08 47.27 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)