ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 1805.00 81.09 6.86 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 33.00 0.00 0.13 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 1514.00 22.20 5.76 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 1303.00 19.10 4.95 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 1428.00 18.82 5.43 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 1.00 0.01 0.00 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 3.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 109.00 0.01 0.41 18.63 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 3958.00 31.22 15.05 48.8 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 4153.00 32.76 15.79 62.41 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 25.00 1.54 0.10 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 1021.00 0.02 3.88 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 2971503.00 61.63 11298.56 91.92 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 2005.00 52.30 7.62 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 7.00 0.18 0.03 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 7.00 0.04 0.03 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 29.00 0.05 0.11 22.31 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 165.00 0.31 0.63 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 244.00 0.46 0.93 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 38.00 0.07 0.14 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 266.00 0.50 1.01 96.38 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 92.00 0.17 0.35 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 67.00 0.49 0.25 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 4566.00 33.19 17.36 50.24 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 25.00 0.18 0.10 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA gastroesophageal sphincter (Tissue)