ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 3670.00 69.84 13.95 100.0 ZFAS1-242 lncRNA gastroesophageal sphincter (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 2912.00 60.87 11.07 100.0 ENST00000837997 lncRNA gastroesophageal sphincter (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 830.00 17.35 3.16 100.0 ENST00000837997 lncRNA gastroesophageal sphincter (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 1331.00 71.67 5.06 79.75 ENST00000839036 lncRNA gastroesophageal sphincter (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 185.00 15.69 0.70 100.0 ENST00000849527 lncRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 439829.00 96.66 1672.36 99.45 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 6.00 0.00 0.02 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 97.00 0.00 0.37 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 262.00 6.31 1.00 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 3548.00 85.49 13.49 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 21.00 5.88 0.08 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 22.00 0.77 0.08 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 30960.00 68.97 117.72 85.35 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 164.00 0.01 0.62 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 6.00 28.57 0.02 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 3605.00 20.77 13.71 91.15 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 4852.00 27.95 18.45 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 71.00 8.01 0.27 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 87.00 0.00 0.33 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 103.00 0.00 0.39 60.95 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 616.00 0.01 2.34 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 196.00 0.00 0.75 91.16 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 1456646.00 30.19 5538.61 53.05 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 125.00 0.00 0.48 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 3.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA gastroesophageal sphincter (Tissue)