ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 9.00 37.50 0.03 100.0 C19orf48P-218 lncRNA gastroesophageal sphincter (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 5.00 20.83 0.02 100.0 C19orf48P-218 lncRNA gastroesophageal sphincter (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 376.00 40.56 1.43 97.41 SNHG18-220 lncRNA gastroesophageal sphincter (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 1261.00 19.60 4.79 100.0 ENST00000817026 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 63.79 1.46 0.24 33.93 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 4.00 0.09 0.02 100.0 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 63.76 1.46 0.24 52.26 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 76.01 1.73 0.29 74.52 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 7.00 0.16 0.03 100.0 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 693.00 15.81 2.63 98.86 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 111.67 2.55 0.42 64.55 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 160.00 3.65 0.61 86.96 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 55.19 1.26 0.21 16.23 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 325.93 7.45 1.24 74.93 ENST00000823801 lncRNA gastroesophageal sphincter (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 1312.00 71.77 4.99 85.86 ENST00000827714 lncRNA gastroesophageal sphincter (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 216.00 11.82 0.82 14.14 ENST00000827714 lncRNA gastroesophageal sphincter (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 486.00 3.64 1.85 100.0 GAS5-377 lncRNA gastroesophageal sphincter (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 2.00 0.01 0.01 100.0 GAS5-377 lncRNA gastroesophageal sphincter (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 427.00 3.20 1.62 100.0 GAS5-377 lncRNA gastroesophageal sphincter (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 11349.00 84.93 43.15 100.0 GAS5-377 lncRNA gastroesophageal sphincter (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 56691.00 94.03 215.56 99.45 ZFAS1-238 lncRNA gastroesophageal sphincter (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 48.00 0.08 0.18 100.0 ZFAS1-238 lncRNA gastroesophageal sphincter (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 35.00 0.06 0.13 100.0 ZFAS1-238 lncRNA gastroesophageal sphincter (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 833.00 1.38 3.17 100.0 ZFAS1-238 lncRNA gastroesophageal sphincter (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 1160.00 22.07 4.41 100.0 ZFAS1-242 lncRNA gastroesophageal sphincter (Tissue)