ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 13.00 35.14 0.05 100.0 MIR374A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 5521.29 0.40 20.99 50.94 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 5165.00 0.37 19.64 53.61 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 20.00 0.00 0.08 100.0 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 16092.00 1.16 61.19 75.43 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 57400.00 4.15 218.25 81.16 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 226.00 0.02 0.86 97.41 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 16.00 0.00 0.06 21.33 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 4978.00 0.36 18.93 54.44 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 63.00 0.00 0.24 100.0 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 5365.75 0.39 20.40 54.88 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 7341.00 0.53 27.91 58.28 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 1090086.00 78.79 4144.84 98.79 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 3197.88 0.23 12.16 48.93 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 12369.00 0.89 47.03 84.92 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 6058.16 0.44 23.03 48.86 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 135.00 0.01 0.51 88.24 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 6192.00 0.45 23.54 73.82 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 9095.00 0.66 34.58 53.89 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 131.00 15.58 0.50 100.0 Y_RNA.14-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 52.00 9.04 0.20 100.0 SNORD115-34-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 6.00 8.82 0.02 100.0 RNU5E-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 6.00 0.17 0.02 2.59 RNA5SP370-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 29.00 10.21 0.11 100.0 SNORA31-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 59.00 1.68 0.22 100.0 RNA5SP389-201 rRNA pseudogene gastroesophageal sphincter (Tissue)