ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 17965.00 81.32 68.31 91.11 MIR151A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 379.00 98.19 1.44 100.0 DENND3-221 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 219.00 1.33 0.83 65.37 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 208.00 1.27 0.79 35.8 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 373.00 2.27 1.42 64.2 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 260.00 1.58 0.99 100.0 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 1014.00 6.18 3.86 100.0 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 362.00 2.21 1.38 100.0 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 721.00 4.39 2.74 66.76 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 91.00 0.55 0.35 100.0 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 2358.00 79.66 8.97 100.0 HSPA8-211 retained intron gastroesophageal sphincter (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 110.00 16.22 0.42 100.0 SCARNA9-201 lncRNA gastroesophageal sphincter (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 16129.00 95.61 61.33 100.0 TAF1D-215 retained intron gastroesophageal sphincter (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 92.00 0.55 0.35 100.0 TAF1D-215 retained intron gastroesophageal sphincter (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 701.00 50.32 2.67 100.0 HSPA8-215 retained intron gastroesophageal sphincter (Tissue)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 8.00 0.57 0.03 100.0 HSPA8-215 retained intron gastroesophageal sphincter (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 8.00 2.80 0.03 100.0 RPS2-215 retained intron gastroesophageal sphincter (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 814515.00 74.26 3097.04 75.27 ENST00000548801 lncRNA gastroesophageal sphincter (Tissue)
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 48.00 2.99 0.18 100.0 ENST00000554988 lncRNA gastroesophageal sphincter (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 39.00 2.43 0.15 100.0 ENST00000554988 lncRNA gastroesophageal sphincter (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 319.00 19.85 1.21 100.0 ENST00000554988 lncRNA gastroesophageal sphincter (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 8563.00 74.06 32.56 100.0 SNHG14-220 retained intron gastroesophageal sphincter (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 2447.00 21.16 9.30 100.0 SNHG14-220 retained intron gastroesophageal sphincter (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 80.00 0.69 0.30 100.0 SNHG14-220 retained intron gastroesophageal sphincter (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 41.00 0.35 0.16 100.0 SNHG14-220 retained intron gastroesophageal sphincter (Tissue)