ENCFF158HXL

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR603XUX
Description: Part of ENCODE experiment ENCSR603XUX. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 432.00 2.27 3.70 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 336.00 45.04 2.88 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 4399.00 81.34 37.67 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 112.00 10.12 0.96 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 93.00 0.10 0.80 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 87.00 0.09 0.75 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 119.00 0.13 1.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 1222.00 1.29 10.47 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 1375.00 1.45 11.78 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 21.00 0.02 0.18 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 464.00 0.09 3.97 67.34 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 645.00 0.13 5.52 61.6 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 1480.00 0.30 12.68 93.73 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 4953.00 32.21 42.42 90.19 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 2830.00 92.79 24.24 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 3266.00 50.70 27.97 82.5 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 426.00 92.01 3.65 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 79.00 0.20 0.68 98.75 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 1.00 0.00 0.01 1.25 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 24989.00 62.41 214.02 92.21 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 1442.96 23.69 12.36 83.8 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 688.20 11.30 5.89 42.77 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 1107.00 18.18 9.48 89.06 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 80873.00 89.57 692.63 94.09 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 207.00 2.82 1.77 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA right lobe of liver (Tissue)