ENCFF158HXL

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR603XUX
Description: Part of ENCODE experiment ENCSR603XUX. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 1458.00 6.69 12.49 100.0 SNHG5-273 lncRNA right lobe of liver (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 208.81 0.96 1.79 90.78 SNHG5-273 lncRNA right lobe of liver (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 63.00 0.29 0.54 100.0 SNHG5-273 lncRNA right lobe of liver (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 74.00 0.34 0.63 100.0 SNHG5-273 lncRNA right lobe of liver (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 0.94 0.00 0.01 0.41 SNHG5-273 lncRNA right lobe of liver (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 7819.00 35.90 66.97 100.0 SNHG5-273 lncRNA right lobe of liver (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 207.00 0.95 1.77 100.0 SNHG5-273 lncRNA right lobe of liver (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 4793.00 22.01 41.05 100.0 SNHG5-273 lncRNA right lobe of liver (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 464.00 2.13 3.97 100.0 SNHG5-273 lncRNA right lobe of liver (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 402.00 1.08 3.44 63.11 MEG8-251 lncRNA right lobe of liver (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 35596.00 95.41 304.86 99.05 MEG8-251 lncRNA right lobe of liver (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 272.00 0.73 2.33 41.72 MEG8-251 lncRNA right lobe of liver (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 122.00 0.33 1.04 82.99 MEG8-251 lncRNA right lobe of liver (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 117.00 36.22 1.00 100.0 FMN2-209 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 1471.00 6.75 12.60 100.0 LINC02739-203 lncRNA right lobe of liver (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 484.00 2.22 4.15 31.61 LINC02739-203 lncRNA right lobe of liver (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 742.00 3.40 6.35 100.0 LINC02739-203 lncRNA right lobe of liver (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 1699.00 7.79 14.55 100.0 LINC02739-203 lncRNA right lobe of liver (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 196.00 0.90 1.68 100.0 LINC02739-203 lncRNA right lobe of liver (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 1047.00 4.80 8.97 68.39 LINC02739-203 lncRNA right lobe of liver (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 488.00 23.99 4.18 100.0 SNHG10-212 lncRNA right lobe of liver (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 1336.00 74.06 11.44 100.0 MIR222HG-206 lncRNA right lobe of liver (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 262.00 14.52 2.24 80.62 MIR222HG-206 lncRNA right lobe of liver (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 18.00 1.00 0.15 100.0 MIR222HG-206 lncRNA right lobe of liver (Tissue)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 35.00 10.48 0.30 100.0 RPSA-216 retained intron right lobe of liver (Tissue)