ENCFF158HXL

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR603XUX
Description: Part of ENCODE experiment ENCSR603XUX. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 6057.00 23.01 51.87 100.0 RABGGTB-213 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 836.00 15.46 7.16 100.0 GNL3-211 retained intron right lobe of liver (Tissue)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 4174.00 77.17 35.75 100.0 GNL3-211 retained intron right lobe of liver (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 184.00 69.43 1.58 100.0 RPL5-205 retained intron right lobe of liver (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 126.00 0.71 1.08 100.0 ZBED9-AS1-201 lncRNA right lobe of liver (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 1399.00 92.59 11.98 100.0 RPS3A-206 retained intron right lobe of liver (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 19345.00 97.54 165.68 100.0 COX7C-203 protein coding right lobe of liver (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 29749.31 56.49 254.79 84.21 RACK1-229 protein coding right lobe of liver (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 11158.00 21.19 95.56 99.77 RACK1-229 protein coding right lobe of liver (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 1277.00 2.43 10.94 100.0 RACK1-229 protein coding right lobe of liver (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 5384.67 10.23 46.12 21.71 RACK1-229 protein coding right lobe of liver (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 464.00 12.72 3.97 100.0 RACK1-230 retained intron right lobe of liver (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 19.00 0.52 0.16 42.22 RACK1-230 retained intron right lobe of liver (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 1075.00 2.85 9.21 100.0 RNA5SP486-201 rRNA pseudogene right lobe of liver (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 8512.00 90.70 72.90 100.0 SCARNA5-201 scaRNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 1340.00 2.42 11.48 100.0 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 21446.00 38.66 183.67 95.58 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 8897.00 16.04 76.20 95.64 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 1951.00 3.52 16.71 100.0 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1347.00 2.43 11.54 79.85 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 2003.00 3.61 17.15 68.97 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 515.00 0.93 4.41 100.0 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 4429.00 7.98 37.93 81.7 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 937.00 1.69 8.02 100.0 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 95.00 0.17 0.81 21.06 RNY4-201 misc RNA right lobe of liver (Tissue)