ENCFF158HXL

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR603XUX
Description: Part of ENCODE experiment ENCSR603XUX. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1182.00 10.34 10.12 100.0 SNORD100-201 snoRNA right lobe of liver (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 31.00 0.27 0.27 100.0 SNORD100-201 snoRNA right lobe of liver (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 8761.00 76.62 75.03 100.0 SNORD100-201 snoRNA right lobe of liver (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 3803.00 73.79 32.57 100.0 SNORD111B-201 snoRNA right lobe of liver (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 162.00 1.42 1.39 100.0 RNU2-36P-201 snRNA right lobe of liver (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 747.00 6.53 6.40 100.0 RNU2-36P-201 snRNA right lobe of liver (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 1672.00 0.95 14.32 100.0 SNORD19C-201 snoRNA right lobe of liver (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 170931.00 96.73 1463.92 98.83 SNORD19C-201 snoRNA right lobe of liver (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 146.00 1.83 1.25 100.0 SNORD12B-201 snoRNA right lobe of liver (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 7006.00 87.95 60.00 100.0 SNORD12B-201 snoRNA right lobe of liver (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 3.00 0.17 0.03 100.0 Y_RNA.609-201 misc RNA right lobe of liver (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 678.00 51.76 5.81 100.0 Y_RNA.612-201 misc RNA right lobe of liver (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 318.00 37.90 2.72 100.0 SNORD71-201 snoRNA right lobe of liver (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 94.00 11.20 0.81 100.0 SNORD71-201 snoRNA right lobe of liver (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 805648.00 88.19 6899.91 95.39 MIR194-2HG-201 lncRNA right lobe of liver (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 100117.00 10.96 857.44 41.14 MIR194-2HG-201 lncRNA right lobe of liver (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 96.00 87.27 0.82 100.0 RPS7P15-201 processed pseudogene right lobe of liver (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 11.00 0.25 0.09 100.0 SNORD62B-201 snoRNA right lobe of liver (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 1097.00 24.53 9.40 94.81 SNORD62B-201 snoRNA right lobe of liver (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 547.00 12.23 4.68 100.0 SNORD62B-201 snoRNA right lobe of liver (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 371.00 8.30 3.18 100.0 SNORD62B-201 snoRNA right lobe of liver (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 281.00 99.65 2.41 100.0 MRPL32-203 nonsense mediated decay right lobe of liver (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 18.00 69.23 0.15 100.0 ENST00000436739 lncRNA right lobe of liver (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 430.00 4.43 3.68 100.0 TMEM107-204 protein coding right lobe of liver (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 1597.00 16.45 13.68 68.78 TMEM107-204 protein coding right lobe of liver (Tissue)