ENCFF158HXL

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR603XUX
Description: Part of ENCODE experiment ENCSR603XUX. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 24.00 88.89 0.21 100.0 MIR301B-201 miRNA right lobe of liver (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 912.00 50.36 7.81 78.35 RNU1-82P-201 snRNA right lobe of liver (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 2898.00 17.70 24.82 100.0 SNORD66-201 snoRNA right lobe of liver (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 287.00 1.75 2.46 100.0 SNORD66-201 snoRNA right lobe of liver (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 4680.00 28.59 40.08 74.59 SNORD66-201 snoRNA right lobe of liver (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 3.00 0.02 0.03 100.0 SNORD66-201 snoRNA right lobe of liver (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 19.00 63.33 0.16 100.0 U3.17-201 snoRNA right lobe of liver (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 4882.00 94.63 41.81 100.0 SNORD17-201 snoRNA right lobe of liver (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 1219.00 76.28 10.44 100.0 SNORD72-201 snoRNA right lobe of liver (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 258.00 53.75 2.21 100.0 SNORD70B-201 snoRNA right lobe of liver (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 1389.00 56.21 11.90 86.17 RNY4P18-201 misc RNA right lobe of liver (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 2889.00 13.99 24.74 100.0 SNORD69-201 snoRNA right lobe of liver (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 2504.00 12.12 21.45 100.0 SNORD69-201 snoRNA right lobe of liver (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 1430.00 6.92 12.25 100.0 SNORD69-201 snoRNA right lobe of liver (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 11072.00 53.60 94.83 100.0 SNORD69-201 snoRNA right lobe of liver (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 108568.00 86.55 929.82 92.22 B4GALNT2-202 protein coding right lobe of liver (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 426.00 0.34 3.65 100.0 B4GALNT2-202 protein coding right lobe of liver (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 188.00 64.38 1.61 100.0 NDE1-202 protein coding right lobe of liver (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 13.00 43.33 0.11 100.0 MIR450B-201 miRNA right lobe of liver (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 14.00 28.57 0.12 100.0 MIR887-201 miRNA right lobe of liver (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 101.00 98.06 0.87 100.0 MIR889-201 miRNA right lobe of liver (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 39.00 82.98 0.33 100.0 MIR548K-201 miRNA right lobe of liver (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 307.00 73.27 2.63 100.0 MIR320B2-201 miRNA right lobe of liver (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 1.00 100.00 0.01 100.0 MIR1271-201 miRNA right lobe of liver (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 568.00 4.97 4.86 100.0 SNORD100-201 snoRNA right lobe of liver (Tissue)