ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 1535.00 74.95 6.87 93.94 SNORD115-9-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 45210.00 71.65 202.32 83.0 RNA5SP358-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 60.00 1.35 0.27 58.82 RNA5SP145-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 6.00 15.79 0.03 100.0 Y_RNA.105-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 70.00 7.26 0.31 100.0 RNY4P9-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 10.00 0.33 0.04 100.0 RNU5B-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 1050.00 34.37 4.70 100.0 RNU5B-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 339.00 11.10 1.52 100.0 RNU5B-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 8842.00 89.56 39.57 98.04 SNORD115-18-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 400.00 16.50 1.79 79.84 RNY4P27-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 160.00 6.60 0.72 61.3 RNY4P27-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 686.00 36.66 3.07 100.0 Y_RNA.136-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 465.00 80.73 2.08 100.0 SNORD115-41-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 56.00 56.57 0.25 100.0 SNORD115-33-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 2890.00 91.43 12.93 97.93 SNORD114-25-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 717.00 78.53 3.21 100.0 SNORD113-7-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363856.1 ENST00000363856.1_2_82_+ 2–82 42.00 46.15 0.19 100.0 SNORD115-8-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 220.00 53.66 0.98 100.0 Y_RNA.181-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 145.00 53.70 0.65 100.0 SNORD115-16-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 375.00 54.59 1.68 100.0 SNORD115-32-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 73.00 72.28 0.33 100.0 SNORD115-30-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 5374.00 32.02 24.05 100.0 RNY1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 3522.55 20.99 15.76 55.75 RNY1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 211.87 1.26 0.95 8.6 RNY1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 233.00 1.39 1.04 100.0 RNY1-201 misc RNA esophagus muscularis mucosa (Tissue)