ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 824.00 22.79 3.69 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 869.00 19.47 3.89 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 51.00 0.00 0.23 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 281.00 0.01 1.26 30.44 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 7274.00 45.47 32.55 52.2 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 6660.00 41.63 29.80 58.74 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 5.00 0.34 0.02 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 752.00 0.04 3.37 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 1158477.00 66.13 5184.23 92.92 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 1343.00 49.14 6.01 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 13.00 0.49 0.06 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 60.00 0.28 0.27 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 103.00 0.19 0.46 29.43 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 89.00 0.17 0.40 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 277.00 0.51 1.24 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 5.00 0.01 0.02 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 586.00 1.09 2.62 99.32 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 76.00 0.14 0.34 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 7.00 0.05 0.03 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 6536.00 44.38 29.25 50.93 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 4.00 0.03 0.02 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 56.00 0.08 0.25 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 36.00 0.05 0.16 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 108.00 0.16 0.48 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 60133.00 90.21 269.10 97.71 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus muscularis mucosa (Tissue)