ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 51.00 6.40 0.23 100.0 ENST00000817026 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 16.39 0.49 0.07 43.14 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 3.00 0.09 0.01 100.0 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 67.42 2.02 0.30 38.75 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 21.00 0.63 0.09 100.0 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 542.00 16.27 2.43 96.61 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 106.98 3.21 0.48 48.41 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 38.00 1.14 0.17 25.17 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 28.00 0.84 0.13 82.35 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 91.98 2.76 0.41 32.39 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 255.67 7.68 1.14 77.47 ENST00000823801 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 2135.00 60.34 9.55 71.43 ENST00000827714 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 854.00 24.14 3.82 28.57 ENST00000827714 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 809.00 9.75 3.62 100.0 GAS5-377 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 513.00 6.18 2.30 100.0 GAS5-377 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 6781.00 81.70 30.35 100.0 GAS5-377 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 3.00 1.50 0.01 100.0 TAF12-DT-204 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 52044.00 94.21 232.90 99.46 ZFAS1-238 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 22.00 0.04 0.10 100.0 ZFAS1-238 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 37.00 0.07 0.17 100.0 ZFAS1-238 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1015.00 1.84 4.54 100.0 ZFAS1-238 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 2846.00 27.86 12.74 100.0 ZFAS1-242 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 6984.00 68.36 31.25 100.0 ZFAS1-242 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 3946.00 70.93 17.66 100.0 ENST00000837997 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 249.00 4.48 1.11 100.0 ENST00000837997 lncRNA esophagus muscularis mucosa (Tissue)