ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 201.00 0.02 0.90 53.6 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 697.00 0.07 3.12 100.0 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 4596.00 0.45 20.57 78.18 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 5129.00 0.50 22.95 68.59 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 216589.00 21.06 969.24 62.26 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 5796.00 0.56 25.94 100.0 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 398.00 0.04 1.78 100.0 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 682.00 0.07 3.05 100.0 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 620474.00 60.32 2776.65 82.54 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 20444.00 1.99 91.49 96.96 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 42.00 0.00 0.19 100.0 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 249.00 0.02 1.11 100.0 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 497.00 76.70 2.22 81.88 MIR3142HG-201 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 2353.00 92.09 10.53 100.0 SNHG6-204 retained intron esophagus muscularis mucosa (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 2516.00 9.10 11.26 100.0 MIR151A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 21656.00 78.36 96.91 87.75 MIR151A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 1007.00 99.80 4.51 100.0 DENND3-221 protein coding esophagus muscularis mucosa (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 99.00 2.11 0.44 100.0 WDR74-204 protein coding esophagus muscularis mucosa (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 43.00 0.92 0.19 100.0 WDR74-204 protein coding esophagus muscularis mucosa (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 18.00 0.38 0.08 100.0 WDR74-204 protein coding esophagus muscularis mucosa (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 15.00 0.32 0.07 62.5 WDR74-204 protein coding esophagus muscularis mucosa (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 14.00 0.30 0.06 100.0 WDR74-204 protein coding esophagus muscularis mucosa (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 4.00 0.09 0.02 50.0 WDR74-204 protein coding esophagus muscularis mucosa (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 367.00 7.84 1.64 64.61 WDR74-204 protein coding esophagus muscularis mucosa (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 4.00 0.09 0.02 50.0 WDR74-204 protein coding esophagus muscularis mucosa (Tissue)