ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 6.00 60.00 0.03 100.0 MIR450B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 67.00 20.87 0.30 100.0 MIR887-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 55.00 93.22 0.25 100.0 MIR889-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 2316.00 56.25 10.36 100.0 SNORD111-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 219.00 57.63 0.98 75.0 SNORD88A-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 12.00 85.71 0.05 100.0 MIR548K-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 160.00 66.12 0.72 100.0 MIR320B2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 37.00 97.37 0.17 100.0 MIR1271-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 6733.00 78.68 30.13 100.0 SNORD100-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 925.00 10.81 4.14 100.0 SNORD100-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 260.00 3.04 1.16 100.0 SNORD100-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 64.00 0.75 0.29 100.0 SNORD100-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 2260.00 64.76 10.11 100.0 SNORD111B-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 65.00 16.46 0.29 100.0 RNU2-36P-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 7.00 1.77 0.03 100.0 RNU2-36P-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 21784.00 94.06 97.48 99.28 SNORD19C-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 785.00 3.39 3.51 100.0 SNORD19C-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 489.00 4.07 2.19 100.0 SNORD12B-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 41.00 0.34 0.18 100.0 SNORD12B-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 9680.00 80.62 43.32 89.56 SNORD12B-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 32.00 3.60 0.14 100.0 Y_RNA.609-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 44.00 18.72 0.20 100.0 Y_RNA.612-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 1496.00 0.62 6.69 100.0 SNORD71-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 152.00 0.06 0.68 100.0 SNORD71-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 237477.00 98.51 1062.72 99.82 SNORD71-201 snoRNA esophagus muscularis mucosa (Tissue)