ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 128.00 0.18 0.57 100.0 MT-TY-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 22592.00 32.00 101.10 100.0 MT-TY-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387409.1 ENST00000387409.1_1_28_+ 1–28 1469.00 2.08 6.57 100.0 MT-TY-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 9221.00 13.06 41.26 67.72 MT-TY-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 26854.00 38.04 120.17 92.87 MT-TY-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 45.00 34.62 0.20 100.0 MT-TD-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 14002.00 47.36 62.66 100.0 MT-TK-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 9094.00 30.76 40.70 100.0 MT-TK-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 122.00 0.41 0.55 100.0 MT-TK-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 405.00 1.37 1.81 100.0 MT-TK-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 123.00 3.06 0.55 100.0 MT-TS2-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 123.00 3.06 0.55 100.0 MT-TS2-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 462.00 11.48 2.07 94.29 MT-TS2-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 171.00 10.97 0.77 100.0 MT-TL2-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 126.00 0.02 0.56 100.0 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 628108.00 83.39 2810.81 90.22 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 4763.00 0.63 21.31 79.0 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 1266.00 0.17 5.67 22.76 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 2355.00 0.31 10.54 100.0 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 670.00 0.09 3.00 100.0 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 3354.00 0.45 15.01 89.58 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 144.00 4.42 0.64 100.0 MT-RNR1-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 92.00 2.82 0.41 100.0 MT-RNR1-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 77.00 69.37 0.34 100.0 MIR454-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 139.00 63.76 0.62 100.0 MIR501-201 miRNA esophagus muscularis mucosa (Tissue)